YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|18394294, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.59
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MARLLRCLRR SFIFSSSTSI AYRNPRICVQ SNQSYIFLSS RKFLSSGSYV SEMRRTAFEG  60
   61 NILRLIRLEI QSELDHSPIL QPEESFGPFT VDERPGEQWI SLRRKFGEKE DIKIEATMFD 120
  121 GSVPSSKSTT SDPEDVQLHI TFIVNISKGD GETLEIMCSA WPDTIQITKF FVRKSSQNSP 180
  181 NAYIGPEFQE MEDELQDSVY RFLEERGISD DLAEFLHQYM KNKDKAEYIR WMETVKSYVE 240
  241 QK

Type	Start	End	Confidence
Signal Peptide	1	21	0.59
N-region	1	12
H-region	13	18
C-region	19	21
Cleavage Site	21	22
Non-Cytoplasmic	22	242	0.99