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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|7269165, gi|7...
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSYYSSFFFL FLFSFLTSFR VSAQDPTYVY HTCQNTANYT SNSTYNNNLK TLLASLSSRN  60
   61 ASYSTGFQNA TVGQAPDRVT GLFNCRGDVS TEVCRRCVSF AVNDTLTRCP NQKEATLYYD 120
  121 ECVLRYSNQN ILSTLITTGG VILVNTRNVT SNQLDLLSDL VLPTLNQAAT VALNSSKKFG 180
  181 TRKNNFTALQ SFYGLVQCTP DLTRQDCSRC LQLVINQIPT DRIGARIINP SCTSRYEIYA 240
  241 FYTESAVPPP PPPPSISTPP VSAPPRSGQS SVFFLSCFSC FKDFHCVTGD DITTADSLQL 300
  301 DYRTIQTATD DFVESNKIGQ GGFGEVYKGT LSDGTEVAVK RLSKSSGQGE VEFKNEVVLV 360
  361 AKLQHRNLVR LLGFCLDGEE RVLVYEYVPN KSLDYFLFDP AKKGQLDWTR RYKIIGGVAR 420
  421 GILYLHQDSR LTIIHRDLKA SNILLDADMN PKIADFGMAR IFGLDQTEEN TSRIVGTYGY 480
  481 MSPEYAMHGQ YSMKSDVYSF GVLVLEIISG KKNSSFYQTD GAHDLVSYAW GLWSNGRPLE 540
  541 LVDPAIVENC QRNEVVRCVH IGLLCVQEDP AERPTLSTIV LMLTSNTVTL PVPRQPGLFF 600
  601 QSRIGKDPLD TDTTSKSLLG SVDDASITDI HPR

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle