YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	CE41218
Protein type:	Transmembrane
Type Confidence:	0.98
Topology Confidence:	0.89
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRYNSNYLMY FCLVLGIFAN IYVIIKITLG SSHILEYFQK NSNLSPKCEI NVNNLLSFIE  60
   61 NRHFLDLEQK NSQKSQPNYE KTLQLMLFAF PSGGLGNKLF EIISLHGIAT SLQRKAVINA 120
  121 TNPSFIETLN RNIQPLFPKL ADQFTLRIIP DSLVTHQQTN WGRCCVYDDP SRFLNRSDQN 180
  181 LILDGHYFQS FKYFHHIRPQ VREWLAPSKL QAMRAEILLP AKFRDDFLIC THVRRGDFQY 240
  241 DGLHRPSDAT FTRAATDFLV DLYRKSHERV NVVVLGNDIH FAYTVFEDRV AHFTFLQKPV 300
  301 NNSYDYSLPQ ISPSYTAILT PTLTPEIDLA FSRLFCDVTL ITAPSSTFGW WLSYLAKRTA 360
  361 TTYYRDILES KDGVAGEMHP EDFYPPEWIK LKTDLNGKIS KY

Type	Start	End	Confidence
Cytoplasmic	1	6	0.91
Transmembrane Helix	7	29	0.89
Non-Cytoplasmic	30	402	0.92