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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: SBT46_ARATH
Protein type: Globular with Signal Peptide
Type Confidence: 0.98
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MATAVSYCLL SCIFALLVVS FASAGKDDQD KQVYIVYMGA LPSRVDYMPM SHHTSILQDV  60
   61 TGESSIQDRL VRNYKRSFNG FAARLTESER EILASMDEVV SVFPSKNLNL QTTTSWNFMG 120
  121 LKEGKRTKRN PLIESDTIIG VIDSGIYPES DSFSGKGFGP PPKKWKGVCK GGTNFTCNNK 180
  181 LIGARYYTPK LEGFPESARD NTGHGSHTAS IAAGNAVKHV SFYGLGNGTV RGGVPAARIA 240
  241 VYKVCDPGVI RCTSDGILAA FDDAIADKVD IITVSLGADA VGTFEEDTLA IGAFHAMAKG 300
  301 ILTVNGAGNN GPERRTIVSM APWLFTVAAS NMNRAFITKV VLGNGKTIVG RSVNSFDLNG 360
  361 KKYPLVYGKS ASSRCDASSA GFCSPGCLDS KRVKGKIVLC DTQRNPGEAQ AMGAVASIVR 420
  421 NPYEDAASVF SFPVSVLSED DYNIVLSYVN STKNPKAAVL KSETIFNQKA PVVASYSSRG 480
  481 PNPLIHDILK PDITAPGSEI LAAYSPYVPP SESDTRHVKY TVISGTSMSC PHVAGVAAYI 540
  541 KTFHPLWSPS MIQSAIMTTA WPMNASTSPS NELAEFAYGA GHVDPIAAIH PGLVYEANKS 600
  601 DHITFLCGFN YTGKKLRLIS GDSSSCTKEQ TKSLTRNLNY PSMSAQVSGT KPFKVTFRRT 660
  661 VTNVGRPNAT YKAKVVGSKL KVKVVPAVLS LKSLYEKKSF TVTVSGAGPK AENLVSAQLI 720
  721 WSDGVHFVRS PIVVYA

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle