YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|25289358, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.98
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MENFRYLKFF FFFIFVILSP SEAGNIVDKS SVFLVDVRSF GARANDHRDH TKAFVAAWDK  60
   61 ACKSSSSSVN LIIPRGEFSV GSLRFSGPCT NVSNLTVRVK ASTDLSKYRS GGGWIQFGWI 120
  121 NGLTLTGGGT FDGQGALAWP FNNCTSDSNC KLLPTSLKFV GMNRTVVRRI SSVNSKFFHI 180
  181 ALVECRDFKG TRLNITAPSD SPNTDGIHIE RSSNVYFSRS HIATGDDCVS IGQGNSQITI 240
  241 TSIKCGPGHG ISVGSLGRYP NEKDVNGLVV KDCKISGTTN GIRIKTWANS PGLSAATNMT 300
  301 FENIIMNNVT NPIIIDQSYC PFSSCISNVP SKVELSEIYF KNIRGTSSSL VAVQLHCSRG 360
  361 MPCKKVYLEN VHLDLSSSDG GRKQSSNRGN EAVSSSCRNV RANYIGTQIP PPCH

Type	Start	End	Confidence
Signal Peptide	1	23	0.98
N-region	1	14
H-region	15	20
C-region	21	23
Cleavage Site	23	24
Non-Cytoplasmic	24	414	0.99