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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|25511665, gi|...
Protein type: Transmembrane
Type Confidence: 0.95
Topology Confidence: 0.86
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGQDSNGIEF HQKRHGLLKD QVQLVKRRDS IRYEIVSIQD RLSFEKGFFA VIRACQLLSQ  60
   61 KNDGIILVGV AGPSGAGKTV FTEKILNFLP SVAVISMDNY NDSSRIVDGN FDDPRLTDYD 120
  121 TLLKNLEDLK EGKQVEVPIY DFKSSSRVGY RTLDVPPSRI VIIEGIYALS EKLRPLLDLR 180
  181 VSVTGGVHFD LVKRVLRDIQ RAGQQPEEII HQISETVYPM YKAFIEPDLQ TAQIKIINKF 240
  241 NPFTGFQSPT YILKSRKEVS VDQIKAVLSD GHTETKEETY DIYLLPPGED PESCQSYLRM 300
  301 RNKDGKYSLM FEEWVTDTPF VISPRITFEV SVRLLGGLMA LGYTIATILK RNSHVFATDK 360
  361 VFVKIDWLEQ LNRHYMQVQG KDRQLVQSTA EQLGLEGSFI PRTYIEQIQL EKLINEVMAL 420
  421 PDDLKNKLSL DEDLVSSSSP KEALLRASAD RVAMRNKNLK RGMSHSYSTQ RDKNLSKLAG 480
  481 YSSSDRRYEE RNHDSPANEG FMTLLSEQIS SLNERMDEFT SRIEELNSKL SCNKNSPTQQ 540
  541 SLSIQTEVCN GSAPTSYFIS GLDNGCLTNS IMPHSSSSSQ LAKDSPLMEE ISTISRGQRQ 600
  601 VMHQLDNLCN LMRESSAERS RLARTGSSNS GNRGRSSKSS FLSNVESNKL PLVLTVAICS 660
  661 IGIIVIKSYI NKRQ

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle