YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|48310461, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.82
Topology Confidence:	0.74
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MACHGFLGKP TPKSFGRHHK HARKNRNHQS RCLAAAVAAA GSIFTSLNMS IFTFHNRLLR  60
   61 CVSRFLRLAT TSSATPTRRP TMKQGYKKLH KREPLIRRND KKRTIFLDLD ETLVHSTMEP 120
  121 PIRVNVDFMV RIKIEGAVIP MFVVKRPGVT EFLERISKNY RVAIFTAGLP EYASQVLDKL 180
  181 DKNRVISQRL YRDSCTEVNG RYAKDLSLVA KNDLGSVLLV DDNPFSYSLQ PDNGVPIKPF 240
  241 MDDMEDQELM KLAEFFDGCY QYEDLRDAAA ELLSSKLI

Type	Start	End	Confidence
Cytoplasmic	1	31	0.77
Transmembrane Helix	32	54	0.74
Non-Cytoplasmic	55	278	0.98