YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|6630552, gi\|1...
Protein type:	Transmembrane with Signal Peptide
Type Confidence:	0.73
Topology Confidence:	0.76
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAISPVLFIG LIYLAGGGSL FPGVEAIWLT VPESGERCVY EEIQANVVVV LDYICIDDAF  60
   61 TQLGPTLDVR VTSPYGKELY KIANVTHGQA AFTTSESGTF LACLAMHHDQ SHHSVNSSVI 120
  121 VSLDWKMGIR AKDWDSVAKK EKIEAMELEI RRSTEYASAI RANILYLRIR EAYMREINEK 180
  181 TNTRVNQLGL MSLGVAIVVS ISQVLYLKRY FLKKKLI

Type	Start	End	Confidence
Signal Peptide	1	26	0.81
N-region	1	17
H-region	18	23
C-region	24	26
Cleavage Site	26	27
Non-Cytoplasmic	27	187	0.97
Transmembrane Helix	188	207	0.83
Cytoplasmic	208	217	0.76