YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|7767663
Protein type:	Globular with Signal Peptide
Type Confidence:	0.96
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MARVCLPCSF LRTSTLSILF RSPILSTTAA ISFCSSSEFA DSVAKDDSKR GPLKPGLYLV  60
   61 GTPIGNLEDI TLRSADVILS EDTRHSGKLL QYYNIKAQLL SYHKFNEAQR EQAVLTRLKQ 120
  121 GEIVALISDA GTPGISDPGT QLAKMCAKEN IDVIPIPGAC AVVAALSASG LETDEFTFVG 180
  181 FLPKHSGTRK ERLIVSSNET RTQIFYVPPH KLSQFLEETT PYFGESSLSQ CDIFYLLVLR 240
  241 LRSSPMPGPD IDLWCRQCVI AREITKLHEE FWRGSIAEAK QEFLIRQPKG EITLLIEGKE 300
  301 ETKAENPTES QLEEELRGLI SDGHSLSTAV KTVAERTSMR KKEVYSLALK KFGKQIRVEE 360
  361 EDEADE

Type	Start	End	Confidence
Signal Peptide	1	36	0.86
N-region	1	27
H-region	28	33
C-region	34	36
Cleavage Site	36	37
Non-Cytoplasmic	37	366	0.99