YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|10178119
Protein type:	Globular with Signal Peptide
Type Confidence:	0.82
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGLMNCMVYV VVLSAIAATV TSYPYSSPHT PAYDSPSYEH KGPKYAPHPK PYVYSSPPPP  60
   61 YYTPSPKVNY KSPPPPYVYN SPPPPYYSPS PKVYYKSPPP PYVYSSPPPP YYSPSPKVYY 120
  121 KSPPPPYVYS SPPPLYYSPS PKVYYKSPPP PYVYSSPPPP YYSPSPKVYY KSPPPPYVYS 180
  181 SPPPPYYSPS PKVYYKSPPP PYVYSSPPPP YYSPSPKVYY KSPPPPYVYS SPPPPYYSPS 240
  241 PKVYYKSPPP PYVYSSPPPP YYSPSPKVYY KSPPPPYVYS SPPPPYYSPS PKVYYKSPPP 300
  301 PYVYSSPPPP YYSPSPKVYY KSPPPPYVYS SPPPPYYSPS PNVYYKSPPP PYVYSSPPPP 360
  361 YYSPSPKVHY KSPPPPYVYS SPPPPYYSPS PKVHYKSPPP PYVYSSPPPP YYSPSPKVTY 420
  421 KSPPPPYVYK TPYY

Type	Start	End	Confidence
Signal Peptide	1	22	0.76
N-region	1	13
H-region	14	19
C-region	20	22
Cleavage Site	22	23
Non-Cytoplasmic	23	434	0.99