YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: PME11_ARATH
Protein type: Transmembrane
Type Confidence: 0.95
Topology Confidence: 0.84
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGLYKTKSKR SIANYHHIII INIFILSSIT SSSMASSSSP SSIDFSTAIL IRVDQSGKGD  60
   61 FSKIQEAIES IPPNLNNSQL YFIWVKPGIY REKVVIPAEK PYITLSGTQA SNTFLIWSDG 120
  121 EDILESPTLT IFASDFVCRF LTIQNKFGTA GRAVALRVAA DKAAFYGCVI TSYQDTLLDD 180
  181 NGNHYFKNCY IEGATDFICG SASSLYERCH LHSLSPNNGS ITAQMRTSAT EKSGFTFLGC 240
  241 KLTGSGSTFL GRPWGAYSRV VFAYSFFSNV VAPQGWNQWG DSTKENTVYY GEYKCYGPGA 300
  301 DREQRVEWSK QLSDEEATVF LSKDFIGGKD WLRPAPSHFK NAPKQTQNKE IN

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle