YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|8671873
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.79
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAWNSERSIR ECINRRQVHG PSMLPTLNLT GDVILAEHLS HRFGKIGLGD VVLVRSPRDP  60
   61 KRMVTKRILG LEGDRLTFSA DPLVGDASVS VLVKQHGIAN LGLRVKRCMI DELGWSRRFR 120
  121 KVMFGFREIT CMLQLIHVIL GLYLTVSLKE KLFYGNHLFA CLGLATRILW VIEMTIIYTY 180
  181 TFSNRRKAMV LILFLKPELQ YQMLRFILLV SKKLLYEPTR SKEFIAKQSF KTEQTQRVAI 240
  241 TRGSETMSLI PSIFGGRRTN VFDPFSLDVF DPFEGFLTPS GLANAPAMDV AAFTNAKVDW 300
  301 RETPEAHVFK ADLPGLRKEE VKVEVEDGNI LQISGERSNE NEEKNDKWHR VERSSGKFTR 360
  361 RFRLPENAKM EEIKASMENG VLSVTVPKVP EKKPEVKSID ISG

Type	Start	End	Confidence
Cytoplasmic	1	123	0.96
Transmembrane Helix	124	146	0.89
Non-Cytoplasmic	147	157	0.81
Transmembrane Helix	158	182	0.79
Cytoplasmic	183	403	0.89