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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: STLP2_ARATH
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.44
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MANQSTETNQ PSNMQTYGVP IYAADWIPEV DVRSKIIMDP EKSEDDDESS SSSSSSRSCI  60
   61 VLSGGGGEGR SGISNVILIC RVDLNTNSLS EQPLGRLVVG SDLPYRMAVH PREGGLICAL 120
  121 PNSCKLFHWE DIMSREDNQA GESEEVIKEL RDVGQQLALA FNPEGSVLAA GAEDGTLRVF 180
  181 KWPSMNTLLN ESQAHSSVKC LTFSESGQFL VSLGGPVCRV WDVNASAAVA SLSKEKDEMF 240
  241 ASCRFSVDSA GNEVLYIAAN TERGGSIITC DTKLWKRKWS KPIKKNSISA FNVSADGKLL 300
  301 AIGTLEGDVL ILESTRMQTI QVVKKAHLGL VTALTFSPDS RGLVSVSFDS RARLTMIEQK 360
  361 GDKPGVRWWL LVLLIVLLYV VAYYYMKAKG IIP

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle