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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|5734755, gi|2...
Protein type: Transmembrane
Type Confidence: 0.76
Topology Confidence: 0.70
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLEPRGADIP ILFLVLVVLP VVAYILLGKW SNISEKRVRA NLLAQMAAEE ALRAETVVNA  60
   61 DRGVRFESVA TENRAQRTRT KTVSAGGGAV RAEFDAGARE TVAEQRSDSV TATCGVTVVA 120
  121 PVNNNELHVC ARCFGPAKTR CSRCKSVRYC SGKCQIIHWR VAHKDECVPV ESCSSSSERV 180
  181 SFEKDSVLYD HGMDSTMYSN NTTQAAKGKT SKSSVDFASL GISQNDITPQ INTQGRKSVG 240
  241 KQHSSKANRE SCRRDSATVF DSSDEAASAG GDNKTSHIKH KSRGNSYAAE TNPRRHSVDS 300
  301 SAVQMNGQSF VSGMQESHKH ENNLGVRSSF GCPNTQYPSN ETVRSKDTGI SEESNGISST 360
  361 MGIMKMMGLR NSTKHDDRYK NLKMLFPYEE FLKFFQCEVF DLSPRGLVNC GNSCYANAVL 420
  421 QSLTCTKPLV AYLLRRSHSR SCSGKDWCLM CELEQHVMML RESGGPLSAS RILSHMRSIN 480
  481 CQIGDGSQED AHEFLRLLVA SMQSICLERL GGETKVDPRL QETTLVQHMF GGRLRSKVKC 540
  541 LRCDHESERY ENIMDLTLEI YGWVESLQDA LTQFTRPEDL DGENMYRCSR CAGYVRARKE 600
  601 LSIHEAPNIL TIVLKRFQEG RYGKINKCIS FPEMLDMIPF MTRTGDVPPL YMLYAVIVHL 660
  661 DTLNASFSGH YISYVKDLRG NWYRIDDSEI HPVPMTQVMS EGAYMLFYMR SYPRPQRGEH 720
  721 NGKAPVHHSQ PRNEMKEQRK PVNRFKPRAD HKNTESSSSE WSLFTSSDEA SFTTESTRDS 780
  781 FSTIDYTDVC HVVDSSSPFA IFNNVYHNVE PSPHNTVACR MFSGTKPETR YFVEQETNHN 840
  841 NTVVLDATPS LYPIPAPYPP HDYYDQSMYV NYETNPEFNN GQDQDRTYSY W

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle