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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|3080385, gi|3...
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.99
Topology Confidence: 0.82
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEHVRVIFFF ACFLTLAPFH AFAQVDSYEF DPDFNCVDRG NFTANSTFAG NLNRLVSSLS  60
   61 SLKSQAYGFY NLSSGDSSGE RAYAIGLCRR EVKRDDCVSC IQTAARNLTK QCPLTKQAVV 120
  121 WYTHCMFRYS NRTIYGRKET NPTKAFIAGE EISANRDDFE RLQRGLLDRL KGIAAAGGPN 180
  181 RKYAQGNGSA SAGYRRFYGT VQCTPDLSEQ DCNDCLVFGC NFRFETWRFY EFDADLEPDP 240
  241 PAIQPADSPQ SAARTERTGK GKGGSKVIIA IVIPILLVAL LAICLCLVLK WRKNKSGYKN 300
  301 KGNTVFFFVL SLSFLGKSPL SGSIAEDEFS NTESLLVHFE TLKTATDNFS SENELGRGGF 360
  361 GSVYKGVFPQ GQEIAVKRLS GNSGQGDNEF KNEILLLAKL QHRNLVRLIG FCIQGEERLL 420
  421 VYEFIKNASL DQFIFDTEKR QLLDWVVRYK MIGGIARGLL YLHEDSRFRI IHRDLKASNI 480
  481 LLDQEMNPKI ADFGLAKLFD SGQTMTHRFT SRIAGTYGYM APEYAMHGQF SVKTDVFSFG 540
  541 VLVIEIITGK RNNNGGSNGD EDAEDLLSWV STVSKTKLVN GVWRSWREDT ILSVIDPSLT 600
  601 AGSRNEILRC IHIGLLCVQE SAATRPTMAT VSLMLNSYSF TLPTPLRPAF VLESVVIPSN 660
  661 VSSSTEGLQM SSNDVTVSEF SPR

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle