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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|8052540
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.91
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSMPLQRGIS GVRVSDSSDD LRDSQMKDKT ERARSTENNN LTLRFPFGFL FSNQSSSKHG  60
   61 GGGENGFSAD PYSARSRHRL MLLFLKISLV LIVVIALAGS FWWTISISTS SRGHVYHNYR 120
  121 RLQEQLVSDL WDIGEISLGP NRWKELEYCN IESENFVPCF NVSENLALGY SNGDENDRFC 180
  181 GPGSKQECLE LPPVKYRVPL RWPTGKDIIW HSNVKITAQE VVSSGSITKR MMMMEDDQIS 240
  241 FRSASPMSDE VEDYSHQIAE MIGIKKDNFI EAGVSHTHIR KSQSLSISLV RTILDIGCGY 300
  301 GSFGAHLLSK QILTMCIANY EASGSQVQLT LERGLPAMIG SFISKQLPYP SLSFDMLHCL 360
  361 RCGIDWDQKD GLLLVEIDRV LKPGGYFVWT SPLTNPRNKD HLKRWNFVHD FAESICWTLL 420
  421 NQQDETVVWK KTINTKCYSS RSVIHTHHCC ITESAYGYIY GYLSSPLKMD ALPINRKPGV 480
  481 GPSVCTKGHD VESPYYRPLQ MCIGGTRSRR WIPIEGRTRW PSRSNMNKTE LSLYGLHPEV 540
  541 LGEDAENWKI TVREYWSLLS PLIFSDHPKR PGDEDPSPPY NMLRNVLDMN AQFGGLNSAL 600
  601 LEARKSVWVM NVVPTAGPNH LPMILDRGFV GVLHNWSVQK PYWIFILAIE VFLNISFSSG 660
  661 VNHSRLTREH MTWYMQTISC RFRQVSPEKH VYLLIYSQRL TDCFVQSYNK QNFVQGWVII 720
  721 RDTAQLVEKA RETITQLKWE ARVIEVESSS EQRLLICQKP FTKRQSI

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle