YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|22326868, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.88
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASAMVTSLR LRPNFSAATS PSSSSSAGNV KYRPAVILPG LGNNTGDYKK LEVTLGEYGV  60
   61 PAVVAAVSRL DWFRNAAGLV DPAYWRGTLR PRPVLDWYLN RIDDAVREAN ELAQGQGLCL 120
  121 IGHSAGGWLA RVYMEEYGNS DISLLLTLGT PHLPPPRGLP GVIDQTRGLL YYVEENCAKA 180
  181 VYTPELKYVC IAGRYIRGAR LVDNADADID SDVTVGIDSG EGISELAIAS NKKSGTFRAR 240
  241 FVGQGYKQVC GRADVWGDGV VPEVSAHLEG ALNVSFDGVY HSPVGSDDET RPWYGSPVIV 300
  301 KDWIHHLLE

Type	Start	End	Confidence
Signal Peptide	1	27	0.87
N-region	1	18
H-region	19	24
C-region	25	27
Cleavage Site	27	28
Non-Cytoplasmic	28	309	0.99