YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|6056208
Protein type:	Globular with Signal Peptide
Type Confidence:	0.46
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MATLSSYLLS SPPLCKSRFS ATSLVSGIDF ISFSPRTTLS SSSTVLPAIL SLSVKHNRRR  60
   61 NSLQVKSVAS PTETISEFDE MVSGTKRKYY MLGGKGGVGK TSCAASLAVR FANNGHPTLV 120
  121 VSTDPAHSLS DSFAQDLTGG MLVPVEGPEA PLFALEINPE KAREEFRSAS QMNGGTGVKD 180
  181 FMDGMGLGML VEQVIQFLES PEYNMFTRIV FDTAPTGHTL RLLSLPDFLD ASIGKILKLR 240
  241 QKITSATSAI KSVFGKEEKG PDAADKLEKL RERMVKVREL FRDTESTEFV IVTIPTVMAV 300
  301 SESSRLSASL KKESVPVKRL IVNQLLPPSS SDCKFCSIKR KDQMRALDMI REDSELSALT 360
  361 LMEAPLVDME IRGVPALRFL GDIIWK

Type	Start	End	Confidence
Signal Peptide	1	17	0.46
N-region	1	8
H-region	9	14
C-region	15	17
Cleavage Site	17	18
Non-Cytoplasmic	18	386	0.97