YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	CUTA_ARATH
Protein type:	Globular with Signal Peptide
Type Confidence:	0.95
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASSLTTRLS AVIGSRRSFP IVGAFCVLST LSISSLSSSS PFKSGCAQSF SVVPLLRSKF  60
   61 SSKAFSSSIR MEESSKTVPS IVVYVTVPNR EAGKKLANSI VQEKLAACVN IVPGIESVYE 120
  121 WEGKVQSDSE ELLIIKTRQS LLEPLTEHVN ANHEYDVPEV IALPITGGSD KYLEWLKNST 180
  181 RN

Type	Start	End	Confidence
Signal Peptide	1	39	0.93
N-region	1	30
H-region	31	36
C-region	37	39
Cleavage Site	39	40
Non-Cytoplasmic	40	182	0.99