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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|7428019, gi|7...
Protein type: Globular with Signal Peptide
Type Confidence: 0.97
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEATNVLHLL IISLFSTILL AQATDILIAN QTLKDGDTIV SQGGSRNRYL GIWYKKISLQ  60
   61 TVVWVANRDS PLYDLSGTLK VSENGSLCLF NDRNHIIWSS SSSPSSQKAS LRNPIVQILD 120
  121 TGNLVVRNSG DDQDYIWQSL DYPGDMFLPG MKYGLNFVTG LNRFLTSWRA IDDPSTGNYT 180
  181 NKMDPNGVPQ FFLKKNSVVV FRTGPWNGLR FTGMPNLKPN PIYRYEYVFT EEEVYYTYKL 240
  241 ENPSVLTRMQ LNPNGALQRY TWVDNLQSWN FYLSAMMDSC DQYTLCGSYG SCNINESPAC 300
  301 RCLKGFVAKT PQAWVAGDWS EGCVRRVKLD CGKGEDGFLK ISKLKLPDTR TSWYDKNMDL 360
  361 NECKKVCLRN CTCSAYSPFD IRDGGKGCIL WFGDLIDIRE YNENGQDLYV RLASSEIETL 420
  421 QRESSRVSSR KQEEEDLELP FLDLDTVSEA TSGFSAGNKL GQGGFGPVYK GTLACGQEVA 480
  481 VKRLSRTSRQ GVEEFKNEIK LIAKLQHRNL VKILGYCVDE EERMLIYEYQ PNKSLDSFIF 540
  541 DKERRRELDW PKRVEIIKGI ARGMLYLHED SRLRIIHRDL KASNVLLDSD MNAKISDFGL 600
  601 ARTLGGDETE ANTTRVVGTY GYMSPEYQID GYFSLKSDVF SFGVLVLEIV SGRRNRGFRN 660
  661 EEHKLNLLGH AWRQFLEDKA YEIIDEAVNE SCTDISEVLR VIHIGLLCVQ QDPKDRPNMS 720
  721 VVVLMLSSEM LLLDPRQPGF FNERNLLFSD TVSINLEIPS NNFQTMSVID PR

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle