YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	YUC11_ARATH
Protein type:	Globular with Signal Peptide
Type Confidence:	0.94
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEKEIKILVL IIGAGPAGLA TSACLNRLNI PNIVVERDVC SASLWKRRSY DRLKLHLAKQ  60
   61 FCQLPHMPFP SNTPTFVSKL GFINYLDEYA TRFNVNPRYN RNVKSAYFKD GQWIVKVVNK 120
  121 TTALIEVYSA KFMVAATGEN GEGVIPEIPG LVESFQGKYL HSSEYKNGEK FAGKDVLVVG 180
  181 CGNSGMEIAY DLSKCNANVS IVVRSQVHVL TRCIVRIGMS LLRFFPVKLV DRLCLLLAEL 240
  241 RFRNTSRYGL VRPNNGPFLN KLITGRSATI DVGCVGEIKS GKIQVVTSIK RIEGKTVEFI 300
  301 DGNTKNVDSI VFATGYKSSV SKWLEVDDGD LFNENGMPKR EFPDHWKGKN GLYSAGFGKQ 360
  361 GLAGISRDAR NIARDIDSLV CGRSSKNKLS K

Type	Start	End	Confidence
Signal Peptide	1	22	0.93
N-region	1	13
H-region	14	19
C-region	20	22
Cleavage Site	22	23
Non-Cytoplasmic	23	391	0.99