YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	VA0E1_ARATH
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.89
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGFLITTLIF VVVGIIASLC VRICCNRGPS TNLLHLTLVI TATVCCWMMW AIVYIAQMNP  60
   61 LIVPILSETE

Type	Start	End	Confidence
Non-Cytoplasmic	1	4	0.89
Transmembrane Helix	5	25	0.93
Cytoplasmic	26	32	0.87
Transmembrane Helix	33	56	0.90
Non-Cytoplasmic	57	70	0.92