YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	HIBC7_ARATH
Protein type:	Globular with Signal Peptide
Type Confidence:	0.64
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIKSLSLASA RIFFSRTSPS FLIPFSKLSV SHRRKFSVMA SGSDEFVKGN VYPNGVALIT  60
   61 LDRPKALNAM NLEMDLKYKS LLDEWEYDPG VKCVVVEGST SRAFCAGMDI KGVVAEILMD 120
  121 KNTSLVQKVF TAEYSLICKI AGYRKPYISL MDGITMGFGL GLSGHGRYRV ITERTVLAMP 180
  181 ENGIGLFPDV GFSYIAAHSP GEGSVGAYLG MTGRRISTPS DALFVGLGTH YVPSGKLGSL 240
  241 REAILSADLS KDPQQHIQAT LSNYSSDPET ESHLQMLLPQ IESAFSVSKS VKETIEELKK 300
  301 FQQSSEASVA EWANEAVQGI EKGAPFSLYL THKYFSKVAC AKGKTNNAMA TLNGVMITEY 360
  361 RIALRSALRS DFTEGVRAVL TDKDQNPKWK PASLDEVDET EVDALFMPLS PEFEELNV

Type	Start	End	Confidence
Signal Peptide	1	19	0.63
N-region	1	10
H-region	11	16
C-region	17	19
Cleavage Site	19	20
Non-Cytoplasmic	20	418	0.97