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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|7268963, gi|4...
Protein type: Transmembrane
Type Confidence: 0.94
Topology Confidence: 0.62
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTADSTVALV HSVVSNGDVS NGNTSASSKK SREIDRRRRR RKQKKNNKAS QADVDASDVS  60
   61 AASESKENTD PQPQIVIEYV PEQAEFEDGF NDEFKEIFEK FNFREPLASE EDGTKDESEE 120
  121 KEDVKKKVNS DSDSDDDEQD NQNKEKGISN KKKKLQRRMK IAELKQVSAR PDVVEVWDAT 180
  181 SADPKLLVFL KSYRNTVPVP RHWSQKRKYL QENICDNHGA WTCRCNRRGL LIFFFCLYMK 240
  241 SVVLRFWSKL FNESVWDIPF LKLYFVFVCM IVILLLDASV FVGKRGIEKQ PFHLPDFIAA 300
  301 TGIEKIRQVK VILYQYKAYI EKEDGKKLKQ KQRERMQPKM GKMDIDYQVL HDAFFKYQTK 360
  361 PKLSALGDLY FEGKEFEVKL RETKPGFLSN DLKEALGMPE GAPPPWLINM QRYGPPPSYP 420
  421 HLKIPGLNAP IPIGASFGFH AGGWGKPPVD EYGRPLYGDV FGVQQQDQPN YEEEPIDKSK 480
  481 HWGDLEEEEE EEEEEEEEQE EEMDEEELED GTESVDTLSR YCYHYAFMST PTGIETPDAI 540
  541 ELRKDQRKEP DRALYQVLEE KGESVAPGTL LGTSHTYVIK TGTQEKTGAK RVDLLRGQKT 600
  601 DRVDVSLQPE ELDAMENVLP AKYEEAREEE KLRNKPVDLS DMVVEVMCSR IVGRGKCMTR 660
  661 KGRRRKISNS EVFWKRHGKG FWILDMREIG RDSCSRVISL 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle