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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: RBOHH_ARATH
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.23
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKSNTPTEDS TKWMLESVEI DSMGESSSKE PEINLNKNEG GLKKNASRNL GVGSIIRTLS  60
   61 VSNWRKSGNL GSPSTRKSGN LGPPTNAVPK KTGPQRVERT TSSAARGLQS LRFLDRTVTG 120
  121 RERDAWRSIE NRFNQFSVDG KLPKEKFGVC IGMGDTMEFA AEVYEALGRR RQIETENGID 180
  181 KEQLKLFWED MIKKDLDCRL QIFFDMCDKN GDGKLTEEEV KEVIVLSASA NRLGNLKKNA 240
  241 AAYASLIMEE LDPDHKGYIE MWQLEILLTG MVTNADTEKM KKSQTLTRAM IPERYRTPMS 300
  301 KYVSVTAELM HENWKKLWVL ALWAIINVYL FMWKYEEFMR NPLYNITGRC VCAAKGAAET 360
  361 LKLNMALILV PVCRKTLTIL RSTFLNRVVP FDDNINFHKV IAYMIAFQAL LHTALHIFCN 420
  421 YPRLSSCSYD VFLTYAGAAL GNTQPSYLGL MLTSVSITGV LMIFFMGFSF TLAMHYFRRN 480
  481 IVKLPKPFNV LAGFNAFWYA HHLLVLAYIL LIIHGYYLII EKPWYQKTTW MYLAVPMLFY 540
  541 ASERLFSRLL QEHSHRVNVI KAIVYSGNVL ALYVTKPPGF KYKSGMYMFV KCPDLSKFEW 600
  601 HPFSITSAPG DDYLSVHIRA LGDWTTELRS RFAKTCEPTQ AAAKPKPNSL MRMETRAAGV 660
  661 NPHIEESQVL FPKIFIKGPY GAPAQNYQKF DILLLVGLGI GATPFISILK DMLNHLKPGI 720
  721 PRSGQKYEGS VGGESIGGDS VSGGGGKKFP QRAYFFWVTR EQASFDWFKG VMDDIAEYDK 780
  781 THVIEMHNYL TSMYEAGDAR SALIAMVQKL QHAKNGVDIV SESRIRTHFA RPNWRKVFSE 840
  841 LSSKHEACRI GVFYCGSPTL VRPLKELCQE FSLESSTRFT FHKENF

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle