YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|11908094, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.93
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASSAASPSL SLLSFTSKPP YPSGSQRLFA SFRTDGLFAP LTLKSRRGRG IVVKVDDVDA  60
   61 DGGGADEYDM DDEEVEEVDN KKDYDVEYDP LAAAIAAAGG GGDGDIAFVQ SKSFISTQGW 120
  121 DSDMVVDYRI NEDEFHKLSL MDCDFFIRKP PDPDNDVYDF REMYVTPPDT DIYSIPRVLA 180
  181 PMPQKYIRCA MSDYGCYNVT EPPIDAPRDP LYKSEREISK VFLTKHYRNR RTNDPEFVLD 240
  241 LEEIYVIDSK TKSITRARVL VTVPGGRKRD RKDDLLVIRD NGTSFKIIHV GERDDPTTVI 300
  301 EREEWTKTRE DMEKHLRKLR DFSVSNWF

Type	Start	End	Confidence
Signal Peptide	1	25	0.89
N-region	1	16
H-region	17	22
C-region	23	25
Cleavage Site	25	26
Non-Cytoplasmic	26	328	0.99