YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: Y3174_ARATH
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.84
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTSQLKRTLT KRYGVLELWE IIVIALFAAF IVILVLSVWL SFRKKSKRSN ATTLPVTQSP  60
   61 RFTEEIKEIS VDHGSSNNNG TSYQTLDEKF VEDIENGDKF SGSLEKKPLV GSHLPPSTPS 120
  121 TTAPSPLLGL PEVSHIGWGH WFTLRDLQLA TNHFSKESII GDGGYGVVYH GTLTNKTPVA 180
  181 VKKLLNNPGQ ADKDFRVEVE AIGHVRHKNL VRLLGYCVEG THRMLVYEYM NNGNLEQWLH 240
  241 GDMIHKGHLT WEARIKVLVG TAKALAYLHE AIEPKVVHRD IKSSNILMDD NFDAKLSDFG 300
  301 LAKLLGADSN YVSTRVMGTF GYVAPEYANS GLLNEKSDVY SYGVVLLEAI TGRYPVDYAR 360
  361 PKEEVHMVEW LKLMVQQKQF EEVVDKELEI KPTTSELKRA LLTALRCVDP DADKRPKMSQ 420
  421 VARMLESDEY PVMPREERRR RRNQNAETHR ESTDTNKDND ITTDAKI

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle