YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	PHB6_ARATH
Protein type:	Globular with Signal Peptide
Type Confidence:	0.39
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNFKNVKVPK GPGGGVIAAV VIGGLSLYGA THTLYNVDGG HRAIVFNRLV GIKDKVYPEG  60
   61 THLMIPWFER PIIYDVRAKP YLVESTSGSR DLQMVKIGLR VLTRPMADQL PEVYRSLGEN 120
  121 YRERVLPSII HETLKAVVAQ YNASQLITQR ESVSREIRKI LTLRAANFHI ALDDVSITGL 180
  181 TFGKEFTAAI EGKQVAAQEA ERAKFIVEKA EQDKRSAVIR AEGEAKSAQL IGQAIANNQA 240
  241 FLTLRKIEAA REIAQTISRS ANKVYLSSND LLLNLQAMDL DVKPKK

Type	Start	End	Confidence
Signal Peptide	1	29	0.39
N-region	1	20
H-region	21	26
C-region	27	29
Cleavage Site	29	30
Non-Cytoplasmic	30	286	0.92