YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|9954745, gi\|2...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MATQNKIQKN SLIIFLFTLV VIAQTATSQN CLTIGCPGIN ECCSHTGYCG TNVEHCGFWC  60
   61 LSGPCQLSKS SSSYRLNDGP RGKIESIVTP ALFHRLMRKV GSNCTGKGFY TREAFITAVK 120
  121 SFEGYKGTVA KREIAAILAQ FSYESGNFCY KEEVTSETYC SSSKTYPCQS GKKYYGRGLL 180
  181 QSIKWNEFYG EAGKYLGLPL LKDPDMVARS PEVAFKFAMW FWKTEVGPSL RLGFGATTMR 240
  241 INGIECGGMS WNAEAMQNRI NQYLEICKWF GVNPGKDLYC

Type	Start	End	Confidence
Signal Peptide	1	28	0.98
N-region	1	19
H-region	20	25
C-region	26	28
Cleavage Site	28	29
Non-Cytoplasmic	29	280	0.99