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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: EIN2_ARATH
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.08
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEAEIVNVRP QLGFIQRMVP ALLPVLLVSV GYIDPGKWVA NIEGGARFGY DLVAITLLFN  60
   61 FAAILCQYVA ARISVVTGKH LAQICNEEYD KWTCMFLGIQ AEFSAILLDL TMVVGVAHAL 120
  121 NLLFGVELST GVFLAAMDAF LFPVFASFLE NGMANTVSIY SAGLVLLLYV SGVLLSQSEI 180
  181 PLSMNGVLTR LNGESAFALM GLLGASIVPH NFYIHSYFAG ESTSSSDVDK SSLCQDHLFA 240
  241 IFGVFSGLSL VNYVLMNAAA NVFHSTGLVV LTFHDALSLM EQVFMSPLIP VVFLMLLFFS 300
  301 SQITALAWAF GGEVVLHDFL KIEIPAWLHR ATIRILAVAP ALYCVWTSGA DGIYQLLIFT 360
  361 QVLVAMMLPC SVIPLFRIAS SRQIMGVHKI PQVGEFLALT TFLGFLGLNV VFVVEMVFGS 420
  421 SDWAGGLRWN TVMGTSIQYT TLLVSSCASL CLILWLAATP LKSASNRAEA QIWNMDAQNA 480
  481 LSYPSVQEEE IERTETRRNE DESIVRLESR VKDQLDTTSV TSSVYDLPEN ILMTDQEIRS 540
  541 SPPEERELDV KYSTSQVSSL KEDSDVKEQS VLQSTVVNEV SDKDLIVETK MAKIEPMSPV 600
  601 EKIVSMENNS KFIEKDVEGV SWETEEATKA APTSNFTVGS DGPPSFRSLS GEGGSGTGSL 660
  661 SRLQGLGRAA RRHLSAILDE FWGHLYDFHG QLVAEARAKK LDQLFGTDQK SASSMKADSF 720
  721 GKDISSGYCM SPTAKGMDSQ MTSSLYDSLK QQRTPGSIDS LYGLQRGSSP SPLVNRMQML 780
  781 GAYGNTTNNN NAYELSERRY SSLRAPSSSE GWEHQQPATV HGYQMKSYVD NLAKERLEAL 840
  841 QSRGEIPTSR SMALGTLSYT QQLALALKQK SQNGLTPGPA PGFENFAGSR SISRQSERSY 900
  901 YGVPSSGNTD TVGAAVANEK KYSSMPDISG LSMSARNMHL PNNKSGYWDP SSGGGGYGAS 960
  961 YGRLSNESSL YSNLGSRVGV PSTYDDISQS RGGYRDAYSL PQSATTGTGS LWSRQPFEQF1020
 1021 GVAERNGAVG EELRNRSNPI NIDNNASSNV DAEAKLLQSF RHCILKLIKL EGSEWLFGQS1080
 1081 DGVDEELIDR VAAREKFIYE AEAREINQVG HMGEPLISSV PNCGDGCVWR ADLIVSFGVW1140
 1141 CIHRVLDLSL MESRPELWGK YTYVLNRLQG VIDPAFSKLR TPMTPCFCLQ IPASHQRASP1200
 1201 TSANGMLPPA AKPAKGKCTT AVTLLDLIKD VEMAISCRKG RTGTAAGDVA FPKGKENLAS1260
 1261 VLKRYKRRLS NKPVGMNQDG PGSRKNVTAY GSLG

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle