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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|18413349, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.75
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSKTIILLAF FLSIVLNVQI SFVVAESKVY VVYLGEKEHD NPESVTESHH QMLWSLLGSK  60
   61 EAVLDSIVYS YRHGFSGFAA KLTESQAQQI SELPEVVQVI PNTLYEMTTT RTWDYLGVSP 120
  121 GNSDSLLQKA NMGYNVIVGV IDTGVWPESE MFNDKGYGPI PSRWKGGCES GELFNGSIHC 180
  181 NRKLIGAKYF IDANNAQFGV LNKTENPDYL SPRDFNGHGT HVASTIGGSF LPNVSYLGLG 240
  241 RGTARGGAPG VHIAVYKACW VQRGCSGADV LKAMDEAIHD GVDILSLSLQ TSVPLFPETD 300
  301 ARELTSVGAF HAVAKGIPVV AAASNAGPTA QTLSNVAPWV LTVAATTQDR SFPTAITLGN 360
  361 NITILGQAIF GGSELGFVGL TYPESPLSGD CEKLSANPKS AMEGKVVLCF AASTPSNAAI 420
  421 TAVINAGGLG LIMARNPTHL LRPLRNFPYV SVDFELGTDI LFYIRSTRSP IVNIQASRTL 480
  481 FGQSVSTKVA TFSSRGPNSV SPAILKLFLQ IAINDGGFAM MSGTSMATPV VSGVVVLLKS 540
  541 LHPDWSPSAI KSAIVTTAWR TDPSGEPIFA DGSSRKLADP FDYGGGLINP EKAVKPGLIY 600
  601 DMTTDDYVMY MCSVDYSDIS ISRVLGKITV CPNPKPSVLD LNLPSITIPN LRGEVTLTRT 660
  661 VTNVGPVNSV YKVVIDPPTG VNVAVTPTEL VFDSTTTKRS FTVRVSTTHK VNTGYYFGSL 720
  721 TWTDTLHNVA IPVSVRTQIL QRYYDEN

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle