YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|42565109, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGSRSQNLSF LVLLLLGFVA VSYACDCTPP KPSPAPHKPP KHPVKPPKPP AVKPPKPPAV  60
   61 KPPTPKPPTV KPHPKPPTVK PHPKPPTVKP HPKPPTVKPP HPKPPTKPHP HPKPPIVKPP 120
  121 TKPPPSTPKP PTKPPPSTPK PPTTKPPPST PKPPHHKPPP TPCPPPTPTP TPPVVTPPTP 180
  181 TPPVITPPTP TPPVVTPPTP TPPVITPPTP TPPVITPPTP TPPVVTPPTP TPPVVTPPTP 240
  241 TPPTPIPETC PIDTLKLGAC VDVLGGLIHI GLGKSHAKAE CCPVLGGLLD LDAAVCLCTT 300
  301 IKLKLLNIDL VLPIALELLL DCGKTPPSDF KCPA

Type	Start	End	Confidence
Signal Peptide	1	24	0.99
N-region	1	15
H-region	16	21
C-region	22	24
Cleavage Site	24	25
Non-Cytoplasmic	25	334	0.99