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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: MIRO3_ARATH
Protein type: Transmembrane
Type Confidence: 0.96
Topology Confidence: 0.87
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MWMGVGDSSG SPKPIRIVVV GEKGSGKSSL IMAAARNTFH PNIPSLLPYT NLPSEFFPDR  60
   61 IPATVIDTSS RPEDKGKVVK EVRQADAIVL TFAFDRPETL DRLSKYWLPL FRQLEVRVPI 120
  121 IVAGYEVDNK EAYNHFSIEQ ITSALMKQYR EVETSIQWSA QRLDQAKDVL YYAQKAVIDP 180
  181 VGPVFDQENN VLKPRCIAAL KRIFLLSDHN MDGILSDEEL NELQKKCFDT PLVPCEIKQM 240
  241 KNVMQVTFPQ GVNERGLTLD GFLFLNTRLI EEARIQTLWT MLRKFGYSND LRLGDDLVPY 300
  301 SSFKRQADQS VELTNVAIEF LREVYEFFDS NGDNNLEPHE MGYLFETAPE SPWTKPLYKD 360
  361 VTEENMDGGL SLEAFLSLWS LMTLIDPPRS LEYLMYIRFP SDDPSSAVRV TRKRVLDRKE 420
  421 KKSERKVVQC FVFGPKNAGK SALLNQFIGR SYDDDSNNNN GSTDEHYAVN MVKEPGVISD 480
  481 TDKTLVLKEV RIKDDGFMLS KEALAACDVA IFIYDSSDEY SWNRAVDMLA EVATIAKDSG 540
  541 YVFPCLMVAA KTDLDPFPVA IQESTRVTQD IGIDAPIPIS SKLGDVSNLF RKILTAAENP 600
  601 HLNIPEIESK KKRSCKLNNR SLMAVSIGTA VLIAGLASFR LYTARKQS

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle