YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	B3GT8_ARATH
Protein type:	Globular with Signal Peptide
Type Confidence:	0.97
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRAKAASGKA IIVLCLASFL AGSLFMSRTL SRSYIPEEED HHLTKHLSKH LEIQKDCDEH  60
   61 KRKLIESKSR DIIGEVSRTH QAVKSLERTM STLEMELAAA RTSDRSSEFW SERSAKNQSR 120
  121 LQKVFAVIGI NTAFSSKKRR DSVRQTWMPT GEKLKKIEKE KGIVVRFVIG HSATPGGVLD 180
  181 KAIDEEDSEH KDFLRLKHIE GYHQLSTKTR LYFSTATAMY DAEFYVKVDD DVHVNLGMLV 240
  241 TTLARYQSRP RIYIGCMKSG PVLSQKGVKY HEPEFWKFGE EGNKYFRHAT GQIYAISKDL 300
  301 ATYISTNQGI LHRYANEDVS LGAWMLGLEV EHVDERSMCC GTPPDCQWKA QAGNVCAASF 360
  361 DWSCSGICKS VDRMARVHRA CAEGDTPLAN FRFFV

Type	Start	End	Confidence
Signal Peptide	1	31	0.93
N-region	1	22
H-region	23	28
C-region	29	31
Cleavage Site	31	32
Non-Cytoplasmic	32	395	0.99