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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: SYCC1_ARATH
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.79
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSEMEVEKPD LTLYNTMTQL KEVYKPMNPG KIGIYVCGIT AYDYSHIGHA RAAVSFDLLY  60
   61 RYLRHLGYQV TYVRNFTDVD DKAKNCGEKP LDLSNRFCEE YLLDMAALQC LLPTHQPRVS 120
  121 DHMEQIIKMI EKIIENGCGY AVGGDVFFSV DKSPSYGQLS GQRLDHTQAG KRVAVDSRKR 180
  181 NPADFALRKA AKSGEPSWES PWGHGRPGWH IEFDIHGGGA DLKFPHHENE IAQTCAACED 240
  241 SGVNYWLHNG HVTNNNVKMG KSLNNFFTIR QIAANYHPLA LRHFLMSAQY RSPLNYSVSQ 300
  301 LESSSDALYS LSPYREEMSG DVGKTQQSAE AKEMIKKVKN ALKFINVSIS KLKKMQKKQR 360
  361 MSLVVSLVEV EKAVREVLDV LGLLTTLSYG ELLKDMKQKA LTRAGMGEEE VLQRIEERNM 420
  421 ARKSKDFRRS DRIRELLAFK GIFLEDVPGD TVWRPSTPLT KPKSGLGLGM TAIVFAIVFT 480
  481 FLGFFFYSR

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle