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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: RER5_ARATH
Protein type: Globular with Signal Peptide
Type Confidence: 0.20
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKPTTNGGLL ASQSSSSFSF PRFRGQLPII FSANNNQKKK NLPNPNVVTL CLHSHSNVSS  60
   61 SQIAVTRRAI LVAPPLLAAA ASLFLSISSA ASAETSAESV ALPPVATAPP PPPVEKEEAI 120
  121 TSRIYDASVL GEPMAVGKDK KRVWEKLLNA RIVYLGEAEQ VPTRDDKVLE LEIVRNLRKR 180
  181 CIESDRQLSL ALEAFPLDLQ EQLNQYMDKR MDGEVLKSYV SHWPVQRWQE YEPLLSYCRD 240
  241 NGVKLIACGT PLKVLRTVQA EGIRGLSESE RKLYTPPAGS GFISGFTSFS RSSSLNMNPL 300
  301 TQIVPFGPSS YLSAQARVVE DHTMSQVIVQ AVADGGGTGM LVVVTGANHV EYGSRGTGLP 360
  361 ARISRKIPKK SQLVVLLDPE RQFLRKEGES PVADFLWYSA ARPCSRNCFD RAEIARVMNA 420
  421 AGRRRDALPQ DIQKGLDLGL VSPEILQNFF DLEQYPLISE LTQRFQGFRE RLLADPKFLN 480
  481 RLAIEEAISI TTTLVAQYEK RKENFFEELD YVITDSVRAS VVDFFTVWLP APTLSFISYA 540
  541 DETIGPNSID ALRGLLGSIP DNAFQKSLGG QEWTLSLRIA SVIIGGLKLA GVGVVSSFAA 600
  601 VGSSNALYAI RKFIKPELGV GEQAKRSPML KTALVYGGYL GTSSNIRYQI IAGLIEHRIS 660
  661 DELSSQPLLV NMISFVVRVA NSYFGTQQWI DLARSTGLQT QKSVTTSNQI PEVASQSTVE 720
  721 YSTTEEASMD DLKNQ

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