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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: ACCR4_ARATH
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.74
Topology Confidence: 0.68
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MALTISISCF SSYFVSLLLL VLSSFSFVCF SLSTVSISHI SNQTLVCALN NHSYLQCSSF  60
   61 PLNSIPFSLT GNLRNRRFSG VVSGNGFVCG LISRLDSNTS TLLCWRFSVD GTNMLHKRIY 120
  121 HGPELEELEA GNFRICGVER VSRRLRCWQP YYLPRPDNYR SIALGDNFFC GLSQPPGMIS 180
  181 CEGIAKVPSG DHYIAIAAGS RQACAITVDN DVECWGQTQS LPREKFLALA VGEDRGCGVR 240
  241 WSNGTVVCWG NNNNFSLPQT LKDIHFTSIY AKGPMFCGVA TRNYTLICWG NENFKSGVFT 300
  301 PFQGLISQVV MPGPCRRECP YRPLSGSQSL CGNELMICDL KRNDGEFPDT RAQNSKNKTW 360
  361 SRRNIAFLVV GCVGTFSLLL VISFLIFKSH CRCRVHDSGR LDDTRTIDIP KLEKRLCTLA 420
  421 SLGNPGQLME FSIDELALAT DGFSVRFHLG IGSFGSVYQG VLSDGRHVAI KRAELTNPTL 480
  481 SGTTMRHRRA DKDSAFVNEL ESMSRLNHKN LVRLLGFYED TEERILVYEY MKNGSLADHL 540
  541 HNPQFDPLSW QTRLMIALDA ARGIQYLHEF IVPPVIHRDI KSSNILLDAT WTAKVSDFGL 600
  601 SQMGPTEEDD VSHLSLHAAG TLGYIDPEYY KFQQLTTKSD VYSFGVVLLE LLSGHKAIHN 660
  661 NEDENPRNLV EYVVPYILLD EAHRILDQRI PPPTPYEIEA VAHVGYLAAE CLMPCSRKRP 720
  721 SMVEVVSKLE SALAACLTAP KTETVSRSNT Y

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle