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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: CSLD6_ARATH
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.65
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MMDGESPLRH PRISHVSNSG SDFGSSSDYN KYLVQIPPTP DNNPGPASLS IVLLEIDSNQ  60
   61 ESVPSVSGDI VSGSSGKDNE PDLTDVRINV GEEEEDDTLL SKISYSLTRV VKISPIIIAL 120
  121 YRILIVVRVV SLALFLFWRI RNPNNKALWL WLLSVICELW FAFSWLLDQI PKLFPVNHAT 180
  181 DIEALKATFE TPNPDNPTGK SDLPGIDVFV STADAEKEPP LVTANTILSI LSVDYPVEKL 240
  241 SVYISDDGGS LVTFEAIAEA ASFAKIWVPF CRKHKIEPRN PESYFGLKRD PYKDKVRHDF 300
  301 VRERRYVKRA YDEFKVRVNA LPHSIRRRSD AFNSKEEIKA LEKWKHWKVK VEEDQIKEPR 360
  361 PALVAPKATW MSDGTHWPGT WAVSGPHHSR GDHASVIQVL LDPPGDEPVE GKGGEGRALD 420
  421 LEGVDIRLPM LVYVSREKRP GYDHNKKAGA MNALVRASAI MSNGPFILNL DCDHYVYNSR 480
  481 AFRDGICFMM DHDGDRVSYV QFPQRFEGID PSDRYANKNT VFFDINLRAL DGIQGPMYVG 540
  541 TGCLFRRTAL YGFNPPDVFV VEEEPSGSYC FPLIKKRSPA TVASEPEYYT DEEDRFDIGL 600
  601 IRKQFGSSSM LVNSVKVAEF EGRPLATVHS SRLGRPPGSL TGSRKPLDFA TVNEAVNVIS 660
  661 CWYEDKTEWG FNVGWIYGSV TEDVVTGFRM HEKGWRSFYC VTEPDAFRGS APINLTDRLH 720
  721 QVLRWATGSV EIFFSRNNAI FAGPKLKLLQ RIAYLNVGIY PFTSIFILTY CFLPPLSLFS 780
  781 GHFVVETLTG SFLIYLLIIT LSLCGLAVLE VKWSGISLEE WWRNEQFWLI GGTSAHLVAV 840
  841 LQGILKVIAG VEISFTLTSK SSTGGDDEDD EFADLYLFKW TALMIPPLTI IILNIVAILF 900
  901 AVCRTVFSAN PQWSNLLGGT FFASWVLLHM YPFAKGLMGR GGKTPTVVYV WSGLIAICLS 960
  961 LLYITIKNSE IDGGSFMLV

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle