YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	CRR24_ARATH
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSLSSSVTKH LISASILAIV AMQLPSVHSV LSLNETNAYL HHICINGEGT FKSGSPYEKE  60
   61 IKQLIDFLSS FIKDYSFVHG VSGIGPDDIN VKFQCRGDTL QAKCRSCLAT AFSEIRSKCP 120
  121 NNKGRIIWYD NCHLDLSSIY TYGQIDYKNN FYMYNAKDVR GDKKSFYKNM KAFLHKLKAK 180
  181 ASSKENKPYV KDYMYAAGRE SLGTVKLYAM VQCTQDLSLK NCTVCLDWIM TKLPECCNGK 240
  241 QGGRVLSPSC NFRYELYPFV EN

Type	Start	End	Confidence
Signal Peptide	1	29	0.99
N-region	1	20
H-region	21	26
C-region	27	29
Cleavage Site	29	30
Non-Cytoplasmic	30	262	0.99