YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	CRPM3_ARATH
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.53
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MENIEYLNEI QAVAGKLIHS YGVPVMITLF LRWLASIVAV FLMILDQTKW KYSNNIMASL  60
   61 LAPYLFSSLP IVIFQVLRNG VGKWIALLTV ILRLFLPNHF HESLEIPGAT ILLIVVTPSD 120
  121 IGAIFRDDLR YTGGDVCLLT SFYLINKHTK ACGGIKNSFT QKDKVTYSIC LWILFVYPIL 180
  181 SSFAALFYL

Type	Start	End	Confidence
Cytoplasmic	1	20	0.53
Transmembrane Helix	21	45	0.83
Non-Cytoplasmic	46	55	0.48
Transmembrane Helix	56	77	0.84
Cytoplasmic	78	164	0.62
Transmembrane Helix	165	187	0.90
Non-Cytoplasmic	188	189	0.76