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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: CKX1_ARATH
Protein type: Globular with Signal Peptide
Type Confidence: 0.76
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGLTSSLRFH RQNNKTFLGI FMILVLSCIP GRTNLCSNHS VSTPKELPSS NPSDIRSSLV  60
   61 SLDLEGYISF DDVHNVAKDF GNRYQLPPLA ILHPRSVFDI SSMMKHIVHL GSTSNLTVAA 120
  121 RGHGHSLQGQ ALAHQGVVIK MESLRSPDIR IYKGKQPYVD VSGGEIWINI LRETLKYGLS 180
  181 PKSWTDYLHL TVGGTLSNAG ISGQAFKHGP QINNVYQLEI VTGKGEVVTC SEKRNSELFF 240
  241 SVLGGLGQFG IITRARISLE PAPHMVKWIR VLYSDFSAFS RDQEYLISKE KTFDYVEGFV 300
  301 IINRTDLLNN WRSSFSPNDS TQASRFKSDG KTLYCLEVVK YFNPEEASSM DQETGKLLSE 360
  361 LNYIPSTLFS SEVPYIEFLD RVHIAERKLR AKGLWEVPHP WLNLLIPKSS IYQFATEVFN 420
  421 NILTSNNNGP ILIYPVNQSK WKKHTSLITP NEDIFYLVAF LPSAVPNSSG KNDLEYLLKQ 480
  481 NQRVMNFCAA ANLNVKQYLP HYETQKEWKS HFGKRWETFA QRKQAYDPLA ILAPGQRIFQ 540
  541 KTTGKLSPIQ LAKSKATGSP QRYHYASILP KPRTV

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle