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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: CKX6_ARATH
Protein type: Globular with Signal Peptide
Type Confidence: 0.98
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLIVRSFTIL LLSCIAFKLA CCFSSSISSL KALPLVGHLE FEHVHHASKD FGNRYQLIPL  60
   61 AVLHPKSVSD IASTIRHIWM MGTHSQLTVA ARGRGHSLQG QAQTRHGIVI HMESLHPQKL 120
  121 QVYSVDSPAP YVDVSGGELW INILHETLKY GLAPKSWTDY LHLTVGGTLS NAGISGQAFR 180
  181 HGPQISNVHQ LEIVTGKGEI LNCTKRQNSD LFNGVLGGLG QFGIITRARI ALEPAPTMDQ 240
  241 EQLISAQGHK FDYIEGFVII NRTGLLNSWR LSFTAEEPLE ASQFKFDGRT LYCLELAKYL 300
  301 KQDNKDVINQ EVKETLSELS YVTSTLFTTE VAYEAFLDRV HVSEVKLRSK GQWEVPHPWL 360
  361 NLLVPRSKIN EFARGVFGNI LTDTSNGPVI VYPVNKSKWD NQTSAVTPEE EVFYLVAILT 420
  421 SASPGSAGKD GVEEILRRNR RILEFSEEAG IGLKQYLPHY TTREEWRSHF GDKWGEFVRR 480
  481 KSRYDPLAIL APGHRIFQKA VSYS

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle