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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: PLRX4_ARATH
Protein type: Globular with Signal Peptide
Type Confidence: 0.89
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPFYKQPWVF SKVFVLAMAK PPSFGCCFFL LFFSFLSSSF VSFALTDTEA AFIVQRQLLT  60
   61 LPDNGELPDD IEYEVDLKAT FANTRLKRAY IALQAWKKAI FSDPFNTTGN WHGPHVCGYT 120
  121 GVVCAPALDD SDVTVVAGVD LNGADIAGHL PAELGLMTDV AMFHLNSNRF CGIIPKSFEK 180
  181 LKLMHEFDVS NNRFVGPFPN VVLSWPDVKY FDLRFNDFEG QVPPELFKKE LDAIFLNDNR 240
  241 FTSVIPESLG ESPASVVTFA NNKFTGCIPK SIGNMKNLNE IVFMDNDLGG CFPSEIGKLS 300
  301 NVTVFDASKN SFIGRLPTSF VGLTSVEEID ISGNKLTGLV PHNICQLPNL VNLTYSYNYF 360
  361 SGQGGSCVPG GSRKEIALDD TRNCLASRPE QRSAQECAVV INRPVDCSKD KCAGGSSTPS 420
  421 KPSPVHKPTP VPTTPVHKPT PVPTTPVQKP SPVPTTPVQK PSPVPTTPVH EPSPVLATPV 480
  481 DKPSPVPSRP VQKPQPPKES PQPDDPYDQS PVTKRRSPPP APVNSPPPPV YSPPPPPPPV 540
  541 HSPPPPVHSP PPPPVYSPPP PPPPVHSPPP PVFSPPPPVY SPPPPVHSPP PPVHSPPPPA 600
  601 PVHSPPPPVH SPPPPPPVYS PPPPVFSPPP SQSPPVVYSP PPRPPKINSP PVQSPPPAPV 660
  661 EKKETPPAHA PAPSDDEFII PPFIGHQYAS PPPPMFAGY

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle