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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|3157932, gi|2...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.58
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MATLGDIGVA AAINILTAII FLLAFAILRI QPFNDRVYFP KWYLKGIRSS PLHSGALVSK  60
   61 FVNVNLGSYL RFLNWMPAAL KMPEPELIDH AGLDSAVYLR IYLIGLKIFV PIALLAWSIL 120
  121 VPVNWTSHGL QLAKLRNVTS SDIDKLSISN IENGSDSLYF GRFWTHLVMA YAFTFWTCYV 180
  181 LMKEYEKVAA MRLAFLQNEQ RRPDQFTNLG LSQLLSQVLV RNVPADPDES ISDSVEHFFL 240
  241 VNHPDHYLTH QVVYNANDLA ALVEQKKSTQ NWLDYYQLKY TRNQEHKPRI KTGFLGLWGK 300
  301 KVDAIDHYIA EIEKLNEQER KKVKKDDTSV MPAAFVSFKT RWGAAVSAQT QQSSDPTEWL 360
  361 TEWAPEAREV FWSNLAIPYV SLTVRRLIMH IAFFFLTFFF MIPIAFVQSL ASIEGIEKNA 420
  421 PFLKSIIEND LFKSVIQGFL PGIVLKLFLI FLPSILMVMS KFEGFVSLSS LERRAAFRYY 480
  481 IFNLINVFLG SVITGSAFEQ LDSFLKQSAK EIPKTVGVAI PIKATFFITY IMVDGWAGIA 540
  541 GEILRLKPLI FFHIKNSLLV KTEKDREEAM NPGQINYHAT EPRIQLYFLL GLVYAPVTPV 600
  601 LLPFIIIFFA LAYLVFRHQI INVYNQEYES AARFWPDVHG RIISALIIAQ ILLMGLLSTK 660
  661 GAAQSTPFLL FLPIITFFFH RYCKGRYEPA FLRHPLKEAM VKDTLERARE PNFNLKPYLQ 720
  721 KAYIHPVFKD NDYEDSRFDE ISGYCIEDSD EECVTVPTKR QSRINTPAVS HASRGSSRSP 780
  781 PSK

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle