YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	SKL2_ARATH
Protein type:	Globular with Signal Peptide
Type Confidence:	0.81
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAAFASGLAI IFNSPSLNPV TTQATFLSSN RIRSSPRVFS GFHSLRRRGF RRFSQNVIPD  60
   61 RFNSFSCNCL SAVSTSTIDY EFTDGGKEVE LRLRLKTGEI LSPKDISVDA DGTSLAVKEK 120
  121 RNGLLITLLE TNHLFEKIMP SETIWYIDED QLVVNMKKVD GELKWPDIVE SWESLTAGMM 180
  181 QLLKGASIYI VGDSTEINQK VSRELAVGLG YSPLDSKELL ESFSKQTIDS WILAEGPDSV 240
  241 AEAESSVLES LSSHVRTVVS TLGGKHGAAG RADQWRHLYS GFTVWVSQTE ATDEESAKEE 300
  301 ARRSKQEREI GYSNADVVVK LQGWDPTHAK SVAQASLSAL KQLIISDKGL PGKKSLYIRL 360
  361 GCRGDWPNIK PPGWDPSSDT GPHPQFT

Type	Start	End	Confidence
Signal Peptide	1	22	0.80
N-region	1	13
H-region	14	19
C-region	20	22
Cleavage Site	22	23
Non-Cytoplasmic	23	387	0.99