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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: NADA_ARATH
Protein type: Globular with Signal Peptide
Type Confidence: 0.86
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MALALSVAPT SSSLSSLLSR TPNPSPNFRT THLNFGSQRR IYTINPLLRS FKCLQSSSRD  60
   61 VNASPFSISA IASSSSSSQT TELVPYKLQR LVKEFKSLTE PIDRLKWVLH YASLLPQMPE 120
  121 SSKTESNRVM GCTARVWLDA ELGQDGKMRF CADSDSDVSK GMCSCLIQVL DEASPVEVME 180
  181 LKTEDLAELN VGLLGGERSR VNTWYNVLVS MQKKTRRLVA EREGKVPSFE PFPSLVLTAH 240
  241 GIEAKGSFAQ AQAKYLFPEE SRVEELVNVL KEKKIGVVAH FYMDPEVQGV LTAAQKHWPH 300
  301 ISISDSLVMA DSAVTMAKAG CQFITVLGVD FMSENVRAIL DQAGFEKVGV YRMSDETIGC 360
  361 SLADAASAPA YLNYLEAASR SPPSLHVVYI NTSLETKAFA HELVPTITCT SSNVVQTILQ 420
  421 AFAQMPELTV WYGPDSYMGA NIVKLFQQMT LMTNEEIANI HPKHSLDSIK SLLPRLHYFQ 480
  481 EGTCIVHHLF GHEVVERIKY MYCDAFLTAH LEVPGEMFSL AMEAKKREMG VVGSTQNILD 540
  541 FIKQKVQEAV DRNVDDHLQF VLGTESGMVT SIVAVIRSLL GSSANSKLKV EVVFPVSSDS 600
  601 MTKTSSDSSN SIKVGDVALP VVPGVAGGEG CSIHGGCASC PYMKMNSLSS LLKVCHKLPD 660
  661 LENVYGGFIA ERFKRQTPQG KLIADVGCEP ILHMRHFQAN KELPDKLVHQ VLSCESKR

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle