YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|25411581, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.47
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSRALFRNVA VDTARLIRRN AAASTDQYGK TGVAQSRPYF RSRQLLERAK ETGVSPSPSL  60
   61 GFSSSSSPSR IGFVGWYLGM VKSHPVVTKS VTSSLIYIAA DLSSQTIAKT SSESYDLVRT 120
  121 ARMGGYGLFV LGPTLHYWFN FMSRLFPKQD LITTFKKMAM GQTIYGPIMT VIFFSLNASL 180
  181 QGERGSVILA RLKRDLLPAL FNGVMYWPLC DFITFRFFPV HLQPLVSNSF SYVWTIYMTY 240
  241 MANREKPVAI ST

Type	Start	End	Confidence
Cytoplasmic	1	119	0.87
Transmembrane Helix	120	139	0.85
Non-Cytoplasmic	140	158	0.80
Transmembrane Helix	159	180	0.84
Cytoplasmic	181	195	0.78
Transmembrane Helix	196	215	0.74
Non-Cytoplasmic	216	252	0.47