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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: PSL5_ARATH
Protein type: Globular with Signal Peptide
Type Confidence: 0.95
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRSLLFVLSL ICFCSQTALS WKKEEFRSCD QTPFCKRARS RTPGACSLIV GDVSITDGDL  60
   61 VAKLLPKAPN QGDGDQIKPL ILSLSVYKDG IVRLKIDEDH SLNPPKKRFQ VPDVVVSEFE 120
  121 EKKIWLQKVA TETISGDTSP SSVVYVSDGY EAVVRHDPFE VYVREKSGDR RRVVSLNSHG 180
  181 LFDFEQLGRK TEGDNWEEKF RTHTDSRPSG PQSISFDVSF YDSSFVYGIP EHATSFALKP 240
  241 TKGPGVEESE PYRLFNLDVF EYDHESPFGL YGSIPFMVSH GKSGKTSGFF WLNAAEMQID 300
  301 VLANGWDAES GISLPSSHSR IDTFWMSEAG IVDTFFFVGP EPKDVVKQYA SVTGTSAMPQ 360
  361 LFATGYHQCR WNYKDEEDVA QVDSKFDEHD IPYDVLWLDI EHTDGKRYFT WDSVLFPHPE 420
  421 EMQKKLAAKG RKMVTIVDPH IKRDDSYFLH KEATQMGYYV KDSSGKDFDG WCWPGSSSYI 480
  481 DMLSPEIRKW WGGRFSYKNY VGSTPSLYTW NDMNEPSVFN GPEVTMPRDA LHVGGVEHRE 540
  541 VHNAYGYYFH MATSDGLVMR EEGKDRPFVL SRAIFPGTQR YGAIWTGDNT AEWEHLRVSI 600
  601 PMILTLGLTG ITFSGADIGG FFGNPEPELL VRWYQVGAYY PFFRGHAHHD TKRREPWLFG 660
  661 ERNTELMRDA IHTRYTLLPY FYTLFREANV TGVPVVRPLW MEFPQDEATF SNDEAFMVGS 720
  721 GLLVQGVYTK GTTQASVYLP GKESWYDLRN GKTYVGGKTH KMDAPEESIP AFQKAGTIIP 780
  781 RKDRFRRSSS QMDNDPYTLV VALNSSQEAE GELYIDDGKS FEFRRGSYIH RRFVFSKGVL 840
  841 TSTNLAPPEA RLSSQCLIDR IILLGHSSGP KSALVEPLNQ KAEIEMGPLR MGGLVASSGT 900
  901 KVLTIRKPGV RVDQDWTVKI L

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle