YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|9857538, gi\|2...
Protein type:	Transmembrane
Type Confidence:	0.95
Topology Confidence:	0.90
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLDSAHRQYS THSPSETKSQ KMLYYLTAVV FGMVGLTYAA VPLYRTFCQA TGYGGTVQRK  60
   61 ETVEEKIARH SESGTVTERE IVVQFNADVA DGMQWKFTPT QREVRVKPGE SALAFYTAEN 120
  121 KSSAPITGVS TYNVTPMKAG VYFNKIQCFC FEEQRLLPGE QIDMPVFFYI DPEFETDPRM 180
  181 DGINNLILSY TFFKVSEENT TETVNNNNSV PVQETN

Type	Start	End	Confidence
Cytoplasmic	1	20	0.91
Transmembrane Helix	21	41	0.90
Non-Cytoplasmic	42	216	0.96