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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|6573766
Protein type: Transmembrane
Type Confidence: 0.61
Topology Confidence: 0.55
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFIHNDPFLC EKLKTLRFDF ISSSALSLSL GCSVNVGVYL LRQATPIITR GGRISRPISK  60
   61 NLCFVLFSSS PKTSLLKPRA QSSGYKSYRN DSLENNSLVF KGDERVVGLV GKVVDDAFDK 120
  121 VDRFQSSSTI VAIVTPIGGP PGAVGIVRLS GPKAVEVARR VFRSAKKTKK KESDSDTWRP 180
  181 KSHFVEYGAV VDSNGNVVDE VLAVPMLAPR SYTREDVVEL QCHGSEVCLR RVLRTCVEAG 240
  241 ARLAEPGEFT LRAFLNGRLD LSQAENVEKL ISAKSSAAAD AALEGIQGGF SSLVKSLRAQ 300
  301 CIELLTEIEA RLDFEDEMPP LDIESVINKI TSMSQDVESA LDTANYDKLL QSGLQIAIVG 360
  361 RPNVGKSSLL NAWSKSERAI VTEVAGTTRD VVEANVTVRG VPITLLDTAG IRETNDIVEK 420
  421 IGVERSETAA KVADVIIMAV SAVEGWTEED TELLRKIQSD KVGVSFYDLF GGLLYLKQPM 480
  481 ILVMNKIDCA PPGSCDQLED QRKKEEVFHK SVFTSAVTGQ GIEELEDAIL EILGLDRVPT 540
  541 GGHQWTVNQR QCEQLVRTKE ALVRLREAIE DEIPIDFWTI ELREAALSLA QISGQDVSEE 600
  601 VLSSIFAKFC IGK

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle